Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HcrtO55241 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HcrtO55241 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.06■□□□□ 0.32
HcrtO55241 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HcrtO55241 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.06■□□□□ 0.32
HcrtO55241 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
HcrtO55241 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.06■□□□□ 0.32
HcrtO55241 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HcrtO55241 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HcrtO55241 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HcrtO55241 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.05■□□□□ 0.32
HcrtO55241 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.05■□□□□ 0.32
HcrtO55241 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.05■□□□□ 0.32
HcrtO55241 Gm17661-201ENSMUST00000170317 270 ntBASIC17.05■□□□□ 0.32
HcrtO55241 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HcrtO55241 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.05■□□□□ 0.32
HcrtO55241 Timm23-208ENSMUST00000226683 750 ntBASIC17.05■□□□□ 0.32
HcrtO55241 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HcrtO55241 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.05■□□□□ 0.32
HcrtO55241 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HcrtO55241 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
HcrtO55241 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.04■□□□□ 0.32
HcrtO55241 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.04■□□□□ 0.32
HcrtO55241 Gm7791-201ENSMUST00000219066 539 ntBASIC17.04■□□□□ 0.32
HcrtO55241 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.04■□□□□ 0.32
HcrtO55241 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HcrtO55241 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HcrtO55241 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HcrtO55241 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.03■□□□□ 0.32
HcrtO55241 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Gm37025-201ENSMUST00000195159 829 ntBASIC17.03■□□□□ 0.32
HcrtO55241 Gm21814-202ENSMUST00000203277 873 ntBASIC17.03■□□□□ 0.32
HcrtO55241 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HcrtO55241 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.03■□□□□ 0.32
HcrtO55241 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.03■□□□□ 0.32
HcrtO55241 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HcrtO55241 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HcrtO55241 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HcrtO55241 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HcrtO55241 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HcrtO55241 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HcrtO55241 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HcrtO55241 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.02■□□□□ 0.32
HcrtO55241 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HcrtO55241 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HcrtO55241 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.02■□□□□ 0.32
HcrtO55241 Gm9731-201ENSMUST00000209480 747 ntBASIC17.02■□□□□ 0.32
HcrtO55241 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
HcrtO55241 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms