Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.55□□□□□ -0.24
Pde6dO55057 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Pde6dO55057 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.54□□□□□ -0.24
Pde6dO55057 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Pde6dO55057 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pde6dO55057 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pde6dO55057 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Gm10418-201ENSMUST00000100943 576 ntBASIC13.54□□□□□ -0.24
Pde6dO55057 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.54□□□□□ -0.24
Pde6dO55057 Gm29791-202ENSMUST00000207888 369 ntBASIC13.54□□□□□ -0.24
Pde6dO55057 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.54□□□□□ -0.24
Pde6dO55057 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pde6dO55057 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Pde6dO55057 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6dO55057 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.53□□□□□ -0.24
Pde6dO55057 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.53□□□□□ -0.24
Pde6dO55057 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pde6dO55057 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.53□□□□□ -0.24
Pde6dO55057 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.53□□□□□ -0.24
Pde6dO55057 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pde6dO55057 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pde6dO55057 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pde6dO55057 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pde6dO55057 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pde6dO55057 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pde6dO55057 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Pde6dO55057 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pde6dO55057 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pde6dO55057 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pde6dO55057 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pde6dO55057 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.52□□□□□ -0.25
Pde6dO55057 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.52□□□□□ -0.25
Pde6dO55057 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pde6dO55057 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pde6dO55057 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pde6dO55057 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.52□□□□□ -0.25
Pde6dO55057 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pde6dO55057 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pde6dO55057 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6dO55057 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms