Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.23■□□□□ 0.51
Clcn6O35454 AC134439.1-201ENSMUST00000220923 600 ntBASIC18.23■□□□□ 0.51
Clcn6O35454 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.22■□□□□ 0.51
Clcn6O35454 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Clcn6O35454 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Clcn6O35454 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.22■□□□□ 0.51
Clcn6O35454 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn6O35454 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.21■□□□□ 0.51
Clcn6O35454 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Haglr-201ENSMUST00000100000 2085 ntBASIC18.21■□□□□ 0.51
Clcn6O35454 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.21■□□□□ 0.51
Clcn6O35454 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.21■□□□□ 0.51
Clcn6O35454 Gm8902-201ENSMUST00000174341 1096 ntBASIC18.21■□□□□ 0.51
Clcn6O35454 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.21■□□□□ 0.51
Clcn6O35454 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Clcn6O35454 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.21■□□□□ 0.51
Clcn6O35454 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.21■□□□□ 0.51
Clcn6O35454 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn6O35454 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.21■□□□□ 0.51
Clcn6O35454 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Clcn6O35454 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clcn6O35454 AC139754.2-201ENSMUST00000218037 1455 ntBASIC18.2■□□□□ 0.5
Clcn6O35454 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clcn6O35454 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.2■□□□□ 0.5
Clcn6O35454 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clcn6O35454 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Clcn6O35454 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Clcn6O35454 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.2■□□□□ 0.5
Clcn6O35454 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Clcn6O35454 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Clcn6O35454 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Clcn6O35454 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn6O35454 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Clcn6O35454 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Gm26474-201ENSMUST00000116762 122 ntBASIC18.19■□□□□ 0.5
Clcn6O35454 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Clcn6O35454 Gm6211-202ENSMUST00000167849 925 ntBASIC18.19■□□□□ 0.5
Clcn6O35454 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC18.19■□□□□ 0.5
Clcn6O35454 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC18.19■□□□□ 0.5
Clcn6O35454 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Gm18387-201ENSMUST00000220333 702 ntBASIC18.19■□□□□ 0.5
Clcn6O35454 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Clcn6O35454 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.19■□□□□ 0.5
Clcn6O35454 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn6O35454 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcn6O35454 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.18■□□□□ 0.5
Clcn6O35454 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Gm42852-201ENSMUST00000202649 1379 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms