Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tnfsf11O35235 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.4□□□□□ -0.27
Tnfsf11O35235 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf11O35235 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.38□□□□□ -0.27
Tnfsf11O35235 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Mir8112-201ENSMUST00000184382 131 ntBASIC13.38□□□□□ -0.27
Tnfsf11O35235 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.38□□□□□ -0.27
Tnfsf11O35235 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf11O35235 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.37□□□□□ -0.27
Tnfsf11O35235 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Tnfsf11O35235 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Gm29791-202ENSMUST00000207888 369 ntBASIC13.37□□□□□ -0.27
Tnfsf11O35235 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.37□□□□□ -0.27
Tnfsf11O35235 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf11O35235 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf11O35235 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf11O35235 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf11O35235 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf11O35235 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf11O35235 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms