Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Pkd1O08852 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pkd1O08852 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.85□□□□□ -0.67
Pkd1O08852 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pkd1O08852 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Gm25990-201ENSMUST00000102440 86 ntBASIC10.85□□□□□ -0.67
Pkd1O08852 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Pkd1O08852 Gm14140-201ENSMUST00000119999 995 ntBASIC10.85□□□□□ -0.67
Pkd1O08852 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Chchd1-203ENSMUST00000224633 557 ntBASIC10.85□□□□□ -0.67
Pkd1O08852 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pkd1O08852 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pkd1O08852 Gm7230-201ENSMUST00000173026 815 ntBASIC10.84□□□□□ -0.67
Pkd1O08852 Gm18421-201ENSMUST00000204122 625 ntBASIC10.84□□□□□ -0.67
Pkd1O08852 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pkd1O08852 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC10.84□□□□□ -0.67
Pkd1O08852 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.84□□□□□ -0.67
Pkd1O08852 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Gm35558-201ENSMUST00000222675 2219 ntBASIC10.84□□□□□ -0.67
Pkd1O08852 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pkd1O08852 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Gm8097-201ENSMUST00000117903 829 ntBASIC10.84□□□□□ -0.67
Pkd1O08852 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.84□□□□□ -0.67
Pkd1O08852 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC10.84□□□□□ -0.67
Pkd1O08852 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pkd1O08852 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Pkd1O08852 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.84□□□□□ -0.67
Pkd1O08852 Gm27321-201ENSMUST00000185021 205 ntBASIC10.84□□□□□ -0.67
Pkd1O08852 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.84□□□□□ -0.67
Pkd1O08852 Gm2213-201ENSMUST00000197485 688 ntBASIC10.84□□□□□ -0.67
Pkd1O08852 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pkd1O08852 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Pkd1O08852 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.83□□□□□ -0.68
Pkd1O08852 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.83□□□□□ -0.68
Pkd1O08852 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.83□□□□□ -0.68
Pkd1O08852 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.83□□□□□ -0.68
Pkd1O08852 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.83□□□□□ -0.68
Pkd1O08852 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.83□□□□□ -0.68
Pkd1O08852 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.83□□□□□ -0.68
Pkd1O08852 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pkd1O08852 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.83□□□□□ -0.68
Pkd1O08852 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pkd1O08852 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.82□□□□□ -0.68
Pkd1O08852 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.82□□□□□ -0.68
Pkd1O08852 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.82□□□□□ -0.68
Pkd1O08852 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.82□□□□□ -0.68
Pkd1O08852 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.82□□□□□ -0.68
Pkd1O08852 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pkd1O08852 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pkd1O08852 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms