Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.75■□□□□ 0.43
Ebf3O08791 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ebf3O08791 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ebf3O08791 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.75■□□□□ 0.43
Ebf3O08791 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ebf3O08791 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Ebf3O08791 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf3O08791 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.74■□□□□ 0.43
Ebf3O08791 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ebf3O08791 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.74■□□□□ 0.43
Ebf3O08791 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Ebf3O08791 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ebf3O08791 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf3O08791 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.73■□□□□ 0.43
Ebf3O08791 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.73■□□□□ 0.43
Ebf3O08791 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Ebf3O08791 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.73■□□□□ 0.43
Ebf3O08791 Gm9731-201ENSMUST00000209480 747 ntBASIC17.73■□□□□ 0.43
Ebf3O08791 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ebf3O08791 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf3O08791 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.72■□□□□ 0.43
Ebf3O08791 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf3O08791 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.72■□□□□ 0.43
Ebf3O08791 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf3O08791 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.71■□□□□ 0.43
Ebf3O08791 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf3O08791 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf3O08791 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ebf3O08791 Mir1668-201ENSMUST00000184114 107 ntBASIC17.71■□□□□ 0.43
Ebf3O08791 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ebf3O08791 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ebf3O08791 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf3O08791 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf3O08791 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ebf3O08791 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.71■□□□□ 0.42
Ebf3O08791 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf3O08791 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf3O08791 Gm37025-201ENSMUST00000195159 829 ntBASIC17.7■□□□□ 0.42
Ebf3O08791 Gm5587-201ENSMUST00000206270 674 ntBASIC17.7■□□□□ 0.42
Ebf3O08791 Gm7213-201ENSMUST00000215977 950 ntBASIC17.7■□□□□ 0.42
Ebf3O08791 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Ebf3O08791 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf3O08791 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Ebf3O08791 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf3O08791 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ebf3O08791 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ebf3O08791 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.69■□□□□ 0.42
Ebf3O08791 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.69■□□□□ 0.42
Ebf3O08791 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.69■□□□□ 0.42
Ebf3O08791 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Il3ra-202ENSMUST00000223589 738 ntBASIC17.69■□□□□ 0.42
Ebf3O08791 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms