Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav13d-3J3QMG8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Mir5122-201ENSMUST00000175004 89 ntBASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Gm3375-201ENSMUST00000203929 796 ntBASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Gm9731-201ENSMUST00000209480 747 ntBASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Odf3b-204ENSMUST00000227834 930 ntBASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-3J3QMG8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Gm21814-202ENSMUST00000203277 873 ntBASIC15.02■□□□□ -0
Trav13d-3J3QMG8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-3J3QMG8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms