Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdhr4H3BJZ2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr4H3BJZ2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr4H3BJZ2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr4H3BJZ2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Gm45058-201ENSMUST00000205810 766 ntBASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr4H3BJZ2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr4H3BJZ2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Gm6659-201ENSMUST00000174752 547 ntBASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Gm7791-201ENSMUST00000219066 539 ntBASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Gm7367-201ENSMUST00000057611 492 ntBASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Cdhr4H3BJZ2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr4H3BJZ2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.02
Cdhr4H3BJZ2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Gm10013-201ENSMUST00000106074 672 ntBASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Gm23634-201ENSMUST00000175071 91 ntBASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr4H3BJZ2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdhr4H3BJZ2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdhr4H3BJZ2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdhr4H3BJZ2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms