Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Gm37292-201ENSMUST00000192062 758 ntBASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Gm12382-201ENSMUST00000122005 922 ntBASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh9F8VPK8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Gm10653-202ENSMUST00000139570 835 ntBASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh9F8VPK8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh9F8VPK8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh9F8VPK8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh9F8VPK8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh9F8VPK8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh9F8VPK8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh9F8VPK8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh9F8VPK8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Gm18666-201ENSMUST00000190039 958 ntBASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Gm10517-202ENSMUST00000192970 758 ntBASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms