Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.56■□□□□ 0.4
Atf6F6VAN0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Gm12085-201ENSMUST00000119263 940 ntBASIC17.56■□□□□ 0.4
Atf6F6VAN0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf6F6VAN0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.55■□□□□ 0.4
Atf6F6VAN0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atf6F6VAN0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf6F6VAN0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atf6F6VAN0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf6F6VAN0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atf6F6VAN0 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.55■□□□□ 0.4
Atf6F6VAN0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf6F6VAN0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atf6F6VAN0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6F6VAN0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Gm22240-201ENSMUST00000175225 82 ntBASIC17.53■□□□□ 0.4
Atf6F6VAN0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6F6VAN0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf6F6VAN0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf6F6VAN0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.52■□□□□ 0.4
Atf6F6VAN0 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.52■□□□□ 0.4
Atf6F6VAN0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atf6F6VAN0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf6F6VAN0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf6F6VAN0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf6F6VAN0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf6F6VAN0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf6F6VAN0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Atf6F6VAN0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.51■□□□□ 0.39
Atf6F6VAN0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.51■□□□□ 0.39
Atf6F6VAN0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms