Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.55■□□□□ 0.88
Ube4aE9Q735 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4aE9Q735 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.54■□□□□ 0.88
Ube4aE9Q735 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.54■□□□□ 0.88
Ube4aE9Q735 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.54■□□□□ 0.88
Ube4aE9Q735 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4aE9Q735 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Gm44450-201ENSMUST00000199528 114 ntBASIC20.53■□□□□ 0.88
Ube4aE9Q735 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ube4aE9Q735 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4aE9Q735 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.53■□□□□ 0.88
Ube4aE9Q735 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ube4aE9Q735 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ube4aE9Q735 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ube4aE9Q735 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ube4aE9Q735 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ube4aE9Q735 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
Ube4aE9Q735 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube4aE9Q735 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ube4aE9Q735 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube4aE9Q735 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms