Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Mir6982-201ENSMUST00000184354 68 ntBASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf4lE9Q2N0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf4lE9Q2N0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf4lE9Q2N0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Gm11539-201ENSMUST00000119837 557 ntBASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Gm13436-201ENSMUST00000120418 567 ntBASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms