Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Herc1E9PZP8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.62□□□□□ -0.87
Herc1E9PZP8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Gm18889-201ENSMUST00000174284 929 ntBASIC9.61□□□□□ -0.87
Herc1E9PZP8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Gm11336-201ENSMUST00000118168 334 ntBASIC9.61□□□□□ -0.87
Herc1E9PZP8 Gm14928-201ENSMUST00000120198 477 ntBASIC9.61□□□□□ -0.87
Herc1E9PZP8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Herc1E9PZP8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.6□□□□□ -0.87
Herc1E9PZP8 Gm25948-201ENSMUST00000175334 112 ntBASIC9.6□□□□□ -0.87
Herc1E9PZP8 Rncr4-201ENSMUST00000194541 2234 ntBASIC9.6□□□□□ -0.87
Herc1E9PZP8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Gm7222-201ENSMUST00000117512 906 ntBASIC9.6□□□□□ -0.87
Herc1E9PZP8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc1E9PZP8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.59□□□□□ -0.87
Herc1E9PZP8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Gm13365-201ENSMUST00000121188 973 ntBASIC9.59□□□□□ -0.87
Herc1E9PZP8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.59□□□□□ -0.87
Herc1E9PZP8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Gm3786-201ENSMUST00000202659 378 ntBASIC9.59□□□□□ -0.87
Herc1E9PZP8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc1E9PZP8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Herc1E9PZP8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Herc1E9PZP8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gm27306-201ENSMUST00000183970 107 ntBASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gm37805-201ENSMUST00000192612 1094 ntBASIC9.58□□□□□ -0.88
Herc1E9PZP8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms