Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh17E9PXF0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Gm33142-201ENSMUST00000193913 867 ntBASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh17E9PXF0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh17E9PXF0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh17E9PXF0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Mir1668-201ENSMUST00000184114 107 ntBASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh17E9PXF0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms