Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Srp54bE9PXC0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
Srp54bE9PXC0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Gm17808-201ENSMUST00000200859 894 ntBASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Srp54bE9PXC0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54bE9PXC0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.81■□□□□ 0.28
Srp54bE9PXC0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Srp54bE9PXC0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.8■□□□□ 0.28
Srp54bE9PXC0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms