Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Gm24841-201ENSMUST00000158676 357 ntBASIC15.13■□□□□ 0.01
Dchs1E9PVD3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Dchs1E9PVD3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Gm12350-201ENSMUST00000121208 462 ntBASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Gm27702-201ENSMUST00000184512 56 ntBASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Gm10060-201ENSMUST00000212002 111 ntBASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Dchs1E9PVD3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Dchs1E9PVD3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Gm23935-201ENSMUST00000102303 57 ntBASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Gm24270-201ENSMUST00000102326 57 ntBASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Gm24245-201ENSMUST00000157318 57 ntBASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Gm10052-201ENSMUST00000168019 960 ntBASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Gm9731-201ENSMUST00000209480 747 ntBASIC15.1■□□□□ 0.01
Dchs1E9PVD3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Gm7729-201ENSMUST00000050143 801 ntBASIC15.1■□□□□ 0.01
Dchs1E9PVD3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Dchs1E9PVD3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Gm6736-201ENSMUST00000166583 948 ntBASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms