Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Gm12527-201ENSMUST00000117967 564 ntBASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28043E0CXC2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28043E0CXC2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28043E0CXC2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Gm11249-201ENSMUST00000117071 859 ntBASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm28043E0CXC2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm28043E0CXC2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm28043E0CXC2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms