Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Rrn3B2RS91 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Gm8969-201ENSMUST00000199694 526 ntBASIC17.22■□□□□ 0.35
Rrn3B2RS91 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.22■□□□□ 0.35
Rrn3B2RS91 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrn3B2RS91 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Mir7071-201ENSMUST00000184847 69 ntBASIC17.21■□□□□ 0.35
Rrn3B2RS91 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrn3B2RS91 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rrn3B2RS91 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rrn3B2RS91 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Rrn3B2RS91 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.2■□□□□ 0.34
Rrn3B2RS91 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrn3B2RS91 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.19■□□□□ 0.34
Rrn3B2RS91 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Gm15565-201ENSMUST00000118890 427 ntBASIC17.19■□□□□ 0.34
Rrn3B2RS91 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rrn3B2RS91 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.18■□□□□ 0.34
Rrn3B2RS91 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.18■□□□□ 0.34
Rrn3B2RS91 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrn3B2RS91 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrn3B2RS91 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.17■□□□□ 0.34
Rrn3B2RS91 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrn3B2RS91 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rrn3B2RS91 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.17■□□□□ 0.34
Rrn3B2RS91 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrn3B2RS91 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms