Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Gm12887B1AVM1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Gm12887B1AVM1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Gm12887B1AVM1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Gm12887B1AVM1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Gm12821-201ENSMUST00000120022 600 ntBASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Gm27454-201ENSMUST00000185090 204 ntBASIC13.89□□□□□ -0.19
Gm12887B1AVM1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Gm12887B1AVM1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm12887B1AVM1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.87□□□□□ -0.19
Gm12887B1AVM1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Gm10418-201ENSMUST00000100943 576 ntBASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Nespas-201ENSMUST00000143738 1083 ntBASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm12887B1AVM1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Gm13234-201ENSMUST00000120010 747 ntBASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms