Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Gm25990-201ENSMUST00000102440 86 ntBASIC13.92□□□□□ -0.18
Chd6A3KFM7 Gm11764-201ENSMUST00000120221 623 ntBASIC13.92□□□□□ -0.18
Chd6A3KFM7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Gm2423-201ENSMUST00000074863 733 ntBASIC13.92□□□□□ -0.18
Chd6A3KFM7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd6A3KFM7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Chd6A3KFM7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chd6A3KFM7 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.9□□□□□ -0.18
Chd6A3KFM7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.9□□□□□ -0.18
Chd6A3KFM7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd6A3KFM7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chd6A3KFM7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chd6A3KFM7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chd6A3KFM7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.89□□□□□ -0.19
Chd6A3KFM7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Mir6420-201ENSMUST00000185032 102 ntBASIC13.89□□□□□ -0.19
Chd6A3KFM7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd6A3KFM7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.88□□□□□ -0.19
Chd6A3KFM7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Gm27628-201ENSMUST00000184911 107 ntBASIC13.88□□□□□ -0.19
Chd6A3KFM7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chd6A3KFM7 Golph3-205ENSMUST00000228671 2842 ntBASIC13.87□□□□□ -0.19
Chd6A3KFM7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms