Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-1A0N8R1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-1A0N8R1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-1A0N8R1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.27□□□□□ -0.12
Trav12-1A0N8R1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12-1A0N8R1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12-1A0N8R1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav12-1A0N8R1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12-1A0N8R1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12-1A0N8R1 Gm11249-201ENSMUST00000117071 859 ntBASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-1A0N8R1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms