Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav12d-1A0N8R0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12d-1A0N8R0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12d-1A0N8R0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12d-1A0N8R0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav12d-1A0N8R0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav12d-1A0N8R0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav12d-1A0N8R0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav12d-1A0N8R0 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.77□□□□□ -0.2
Trav12d-1A0N8R0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav12d-1A0N8R0 Gm10849-201ENSMUST00000100397 618 ntBASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Mtag2-201ENSMUST00000058665 714 ntBASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-1A0N8R0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Gm6576-201ENSMUST00000169678 883 ntBASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Trav12d-1A0N8R0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-1A0N8R0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms