Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Gm28729A0A1B0GSW2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm24589-201ENSMUST00000116692 94 ntBASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28729A0A1B0GSW2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm28729A0A1B0GSW2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm28729A0A1B0GSW2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Gm34391-201ENSMUST00000203706 907 ntBASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm28729A0A1B0GSW2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms