Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm22240-201ENSMUST00000175225 82 ntBASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm10698-201ENSMUST00000182663 604 ntBASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcna-ps2A0A140T8V5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm12382-201ENSMUST00000122005 922 ntBASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm13401-201ENSMUST00000117074 291 ntBASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm6576-201ENSMUST00000169678 883 ntBASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm43183-201ENSMUST00000200632 547 ntBASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcna-ps2A0A140T8V5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Mir8112-201ENSMUST00000184382 131 ntBASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Gm37292-201ENSMUST00000192062 758 ntBASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms