Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Gm11643-201ENSMUST00000119578 864 ntBASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Gm13401-201ENSMUST00000117074 291 ntBASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Gm37292-201ENSMUST00000192062 758 ntBASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv17A0A140T8P8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Gm10698-201ENSMUST00000182663 604 ntBASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Gm10812-201ENSMUST00000099864 546 ntBASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trbv17A0A140T8P8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms