Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv1-88A0A140T8N1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Igkv1-88A0A140T8N1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv1-88A0A140T8N1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms