Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Gm35339A0A140LHH9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
Gm35339A0A140LHH9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Gm35339A0A140LHH9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
Gm35339A0A140LHH9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
Gm35339A0A140LHH9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Gm35339A0A140LHH9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
Gm35339A0A140LHH9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
Gm35339A0A140LHH9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Gm35339A0A140LHH9 Gm13418-201ENSMUST00000119097 944 ntBASIC35.91■■■■□ 3.34
Gm35339A0A140LHH9 Gm6736-201ENSMUST00000166583 948 ntBASIC35.91■■■■□ 3.34
Gm35339A0A140LHH9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC35.91■■■■□ 3.34
Gm35339A0A140LHH9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC35.91■■■■□ 3.34
Gm35339A0A140LHH9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Gm35339A0A140LHH9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Gm35339A0A140LHH9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Gm35339A0A140LHH9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Gm35339A0A140LHH9 Gm15173-201ENSMUST00000122049 433 ntBASIC35.9■■■■□ 3.34
Gm35339A0A140LHH9 Gm8349-201ENSMUST00000182720 1003 ntBASIC35.9■■■■□ 3.34
Gm35339A0A140LHH9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC35.9■■■■□ 3.34
Gm35339A0A140LHH9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
Gm35339A0A140LHH9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Gm35339A0A140LHH9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Gm35339A0A140LHH9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Gm35339A0A140LHH9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
Gm35339A0A140LHH9 Gm12260-201ENSMUST00000122447 411 ntBASIC35.89■■■■□ 3.34
Gm35339A0A140LHH9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC35.89■■■■□ 3.34
Gm35339A0A140LHH9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC35.89■■■■□ 3.34
Gm35339A0A140LHH9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Gm35339A0A140LHH9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC35.88■■■■□ 3.34
Gm35339A0A140LHH9 Gm9727-201ENSMUST00000161387 555 ntBASIC35.88■■■■□ 3.33
Gm35339A0A140LHH9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC35.88■■■■□ 3.33
Gm35339A0A140LHH9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC35.88■■■■□ 3.33
Gm35339A0A140LHH9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
Gm35339A0A140LHH9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
Gm35339A0A140LHH9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Gm35339A0A140LHH9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC35.88■■■■□ 3.33
Gm35339A0A140LHH9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC35.87■■■■□ 3.33
Gm35339A0A140LHH9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Gm35339A0A140LHH9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC35.87■■■■□ 3.33
Gm35339A0A140LHH9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC35.87■■■■□ 3.33
Gm35339A0A140LHH9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Gm35339A0A140LHH9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Gm35339A0A140LHH9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Gm35339A0A140LHH9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Auts2-212ENSMUST00000178555 309 ntBASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 AV026068-213ENSMUST00000223675 1171 ntBASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Gm35339A0A140LHH9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC35.85■■■■□ 3.33
Gm35339A0A140LHH9 Gm14822-201ENSMUST00000122247 291 ntBASIC35.85■■■■□ 3.33
Gm35339A0A140LHH9 Gm12497-201ENSMUST00000138778 237 ntBASIC35.85■■■■□ 3.33
Gm35339A0A140LHH9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC35.85■■■■□ 3.33
Gm35339A0A140LHH9 AC225888.1-201ENSMUST00000227184 728 ntBASIC35.85■■■■□ 3.33
Gm35339A0A140LHH9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC35.85■■■■□ 3.33
Gm35339A0A140LHH9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Gm35339A0A140LHH9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC35.85■■■■□ 3.33
Gm35339A0A140LHH9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Gm35339A0A140LHH9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Gm35339A0A140LHH9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Gm35339A0A140LHH9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Gm7506-201ENSMUST00000207758 815 ntBASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Gm35339A0A140LHH9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC35.82■■■■□ 3.33
Gm35339A0A140LHH9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC35.82■■■■□ 3.33
Gm35339A0A140LHH9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 AC154222.1-201ENSMUST00000223882 475 ntBASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Gm35339A0A140LHH9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
Gm35339A0A140LHH9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC35.81■■■■□ 3.32
Gm35339A0A140LHH9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
Gm35339A0A140LHH9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
Gm35339A0A140LHH9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Gm35339A0A140LHH9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC35.8■■■■□ 3.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms