Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm38285-201ENSMUST00000192928 922 ntBASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav13d-4A0A0G2JFX3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm6211-202ENSMUST00000167849 925 ntBASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms