Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V3A0A0G2JEW2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm27389-201ENSMUST00000183622 195 ntBASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm21559-201ENSMUST00000220638 855 ntBASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm8587-201ENSMUST00000076538 843 ntBASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm23634-201ENSMUST00000175071 91 ntBASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm10566-201ENSMUST00000086739 996 ntBASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.49■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V3A0A0G2JEW2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms