Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm21814-202ENSMUST00000203277 873 ntBASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm43799-201ENSMUST00000201845 579 ntBASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm12085-201ENSMUST00000119263 940 ntBASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm3375-201ENSMUST00000203929 796 ntBASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm9987-201ENSMUST00000069768 567 ntBASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms