Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm37292-201ENSMUST00000192062 758 ntBASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm5643-201ENSMUST00000117081 966 ntBASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm43183-201ENSMUST00000200632 547 ntBASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Gm15378-201ENSMUST00000121894 207 ntBASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Gm20760-201ENSMUST00000179197 648 ntBASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9n-2A0A0G2JDP3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.44□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.44□□□□□ -0.42
Trav9n-2A0A0G2JDP3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms