Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav4-3A0A0B4J1K1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms