Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.46■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.46■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Gm29518-201ENSMUST00000190858 372 ntBASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Gm33142-201ENSMUST00000193913 867 ntBASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv5-43A0A0B4J1J2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.42■□□□□ 0.38
Igkv5-43A0A0B4J1J2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms