Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-45A0A0B4J1J1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm29518-201ENSMUST00000190858 372 ntBASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Phf7-203ENSMUST00000226565 1971 ntBASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm21362-201ENSMUST00000194272 928 ntBASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-45A0A0B4J1J1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms