Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm27000-201ENSMUST00000182943 842 ntBASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm14859-201ENSMUST00000117752 357 ntBASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.78■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm29518-201ENSMUST00000190858 372 ntBASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-43A0A0A6YXN5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms