Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Trbv21A0A0A6YX06 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv21A0A0A6YX06 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv21A0A0A6YX06 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv21A0A0A6YX06 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv21A0A0A6YX06 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.83■□□□□ 0.13
Trbv21A0A0A6YX06 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv21A0A0A6YX06 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Gm22240-201ENSMUST00000175225 82 ntBASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Gm2594-201ENSMUST00000214774 742 ntBASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Odf3b-204ENSMUST00000227834 930 ntBASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv21A0A0A6YX06 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Gm715-201ENSMUST00000117865 831 ntBASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv21A0A0A6YX06 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Gm36991-201ENSMUST00000191800 648 ntBASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv21A0A0A6YX06 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.8■□□□□ 0.12
Trbv21A0A0A6YX06 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms