Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-6A0A075B6B2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-6A0A075B6B2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-6A0A075B6B2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm5408-201ENSMUST00000197998 747 ntBASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Tgds-204ENSMUST00000228543 1594 ntBASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms