Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-7A0A075B6B0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm15378-201ENSMUST00000121894 207 ntBASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm6576-201ENSMUST00000169678 883 ntBASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6d-7A0A075B6B0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm10252-201ENSMUST00000209541 832 ntBASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-7A0A075B6B0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-7A0A075B6B0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-7A0A075B6B0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-7A0A075B6B0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-7A0A075B6B0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms