Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-3A0A075B6A4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trav12d-3A0A075B6A4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm22238-201ENSMUST00000175222 88 ntBASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm38205-201ENSMUST00000192243 258 ntBASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav12d-3A0A075B6A4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12d-3A0A075B6A4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms