Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-4-dv10A0A075B651 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-4-dv10A0A075B651 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-4-dv10A0A075B651 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-4-dv10A0A075B651 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-4-dv10A0A075B651 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-4-dv10A0A075B651 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trav4-4-dv10A0A075B651 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trav4-4-dv10A0A075B651 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-4-dv10A0A075B651 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm6576-201ENSMUST00000169678 883 ntBASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms