Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-7-dv9A0A075B639 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gm17661-201ENSMUST00000170317 270 ntBASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-7-dv9A0A075B639 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Gm10698-201ENSMUST00000182663 604 ntBASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6-7-dv9A0A075B639 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms