Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm5874-201ENSMUST00000096101 508 ntBASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.58□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm11643-201ENSMUST00000119578 864 ntBASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.55□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms