Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Gm11539-201ENSMUST00000119837 557 ntBASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Gm13436-201ENSMUST00000120418 567 ntBASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-1A0A075B606 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Gm4974-201ENSMUST00000209974 875 ntBASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-1A0A075B606 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Gm7889-201ENSMUST00000185591 958 ntBASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Gm29791-202ENSMUST00000207888 369 ntBASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13d-1A0A075B606 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms