Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Nkx6-1Q99MA9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Nkx6-1Q99MA9 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.9□□□□□ -1.79
Nkx6-1Q99MA9 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.9□□□□□ -1.79
Nkx6-1Q99MA9 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Nkx6-1Q99MA9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm23578-201ENSMUST00000103943 104 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm14838-201ENSMUST00000118913 248 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm14770-201ENSMUST00000122197 312 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm26275-201ENSMUST00000157101 268 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm23391-201ENSMUST00000157579 104 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm23586-201ENSMUST00000157657 123 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm25664-201ENSMUST00000157697 107 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm26373-201ENSMUST00000157833 103 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm22889-201ENSMUST00000158639 58 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm10067-201ENSMUST00000179462 348 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm25235-201ENSMUST00000179933 107 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm27421-201ENSMUST00000184729 167 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm37239-201ENSMUST00000193510 141 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm45420-201ENSMUST00000211243 425 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Nkx6-1Q99MA9 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm4736-201ENSMUST00000100870 380 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Mir541-201ENSMUST00000102097 90 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm24867-201ENSMUST00000104161 107 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm25168-201ENSMUST00000104189 132 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm23175-201ENSMUST00000104371 132 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm14894-201ENSMUST00000117170 270 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm13729-201ENSMUST00000120328 406 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm13210-201ENSMUST00000121483 273 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm15065-201ENSMUST00000121699 273 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm22984-201ENSMUST00000122751 122 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm26148-201ENSMUST00000157430 68 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm22601-201ENSMUST00000157595 250 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm23084-201ENSMUST00000157850 114 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm23641-201ENSMUST00000157857 101 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm26028-201ENSMUST00000158660 294 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm26287-201ENSMUST00000158887 81 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm24086-201ENSMUST00000175171 98 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm22118-201ENSMUST00000175593 171 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm27520-201ENSMUST00000184872 81 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm7329-201ENSMUST00000185915 210 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm37449-201ENSMUST00000193016 270 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm37361-201ENSMUST00000194345 132 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm18658-201ENSMUST00000195558 270 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm18982-201ENSMUST00000198118 529 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm24147-201ENSMUST00000082763 144 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm26166-201ENSMUST00000083788 107 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx6-1Q99MA9 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm22497-201ENSMUST00000104499 131 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm12571-201ENSMUST00000118132 243 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm12417-201ENSMUST00000119153 403 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms