Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm22758-201ENSMUST00000102275 96 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm14516-201ENSMUST00000120012 252 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm14551-201ENSMUST00000120802 256 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm12086-201ENSMUST00000120863 228 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm8200-201ENSMUST00000122390 222 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm22204-201ENSMUST00000122654 327 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm22476-201ENSMUST00000158902 100 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm28471-201ENSMUST00000185994 615 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm28598-201ENSMUST00000186490 615 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm28057-201ENSMUST00000186603 615 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm29668-201ENSMUST00000187802 315 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm29268-201ENSMUST00000188669 615 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm37172-201ENSMUST00000191926 615 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm17966-201ENSMUST00000193453 594 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm25411-201ENSMUST00000083760 151 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim47Q8C0E3 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.8□□□□□ -1.64
Trim47Q8C0E3 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm38382-201ENSMUST00000193790 2499 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm23273-201ENSMUST00000104058 135 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm15936-201ENSMUST00000118706 460 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm12793-201ENSMUST00000119268 292 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm25965-201ENSMUST00000157170 93 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm23905-201ENSMUST00000157568 109 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm24054-201ENSMUST00000158619 105 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm2862-201ENSMUST00000161524 328 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm29308-201ENSMUST00000188863 315 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm28537-201ENSMUST00000189026 315 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm29631-201ENSMUST00000191065 315 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Trav5-2-201ENSMUST00000199855 280 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm44182-201ENSMUST00000204052 115 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm44032-201ENSMUST00000204841 166 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm44594-201ENSMUST00000208982 407 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 AC160984.2-201ENSMUST00000224927 791 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Mir383-201ENSMUST00000083523 70 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim47Q8C0E3 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm13386-201ENSMUST00000117677 124 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm12954-201ENSMUST00000118610 611 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm22637-201ENSMUST00000158144 283 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm6802-202ENSMUST00000186566 126 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm43649-201ENSMUST00000196596 391 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm42988-201ENSMUST00000198116 225 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm44879-201ENSMUST00000207007 503 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 mt-Tf-201ENSMUST00000082387 68 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm24966-201ENSMUST00000082443 79 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Gm22576-201ENSMUST00000083733 104 ntBASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim47Q8C0E3 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms