Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim35Q8C006 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm43046-201ENSMUST00000198771 2451 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm22650-201ENSMUST00000175138 105 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm27887-201ENSMUST00000184367 102 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Mir7674-201ENSMUST00000184964 63 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm20305-201ENSMUST00000193226 177 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim35Q8C006 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm4321-201ENSMUST00000200520 442 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm43977-201ENSMUST00000203970 189 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm44214-201ENSMUST00000204153 606 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim35Q8C006 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim35Q8C006 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trim35Q8C006 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim35Q8C006 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim35Q8C006 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim35Q8C006 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.54□□□□□ -1.52
Trim35Q8C006 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Trim35Q8C006 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim35Q8C006 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim35Q8C006 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim35Q8C006 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim35Q8C006 Gm24692-201ENSMUST00000157761 146 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 Scarna10-201ENSMUST00000158992 325 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 Gm24495-201ENSMUST00000178575 79 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 Gm22253-201ENSMUST00000179870 79 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim35Q8C006 Gm44032-201ENSMUST00000204841 166 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 Gm20108-201ENSMUST00000219977 153 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC5.53□□□□□ -1.52
Trim35Q8C006 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim35Q8C006 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim35Q8C006 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim35Q8C006 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Trim35Q8C006 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim35Q8C006 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 AC154481.2-201ENSMUST00000222526 3175 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Gm22592-201ENSMUST00000104242 131 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Gm22713-201ENSMUST00000116895 130 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Gm15400-201ENSMUST00000118944 601 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim35Q8C006 AC140930.2-201ENSMUST00000221803 109 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim35Q8C006 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Gm23795-201ENSMUST00000084006 137 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.52□□□□□ -1.53
Trim35Q8C006 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Trim35Q8C006 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim35Q8C006 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 Gm14619-201ENSMUST00000120480 168 ntBASIC5.51□□□□□ -1.53
Trim35Q8C006 Mir1970-201ENSMUST00000157839 104 ntBASIC5.51□□□□□ -1.53
Trim35Q8C006 Gm22706-201ENSMUST00000157907 112 ntBASIC5.51□□□□□ -1.53
Trim35Q8C006 Gm23384-201ENSMUST00000158593 103 ntBASIC5.51□□□□□ -1.53
Trim35Q8C006 Gm25489-201ENSMUST00000158727 141 ntBASIC5.51□□□□□ -1.53
Trim35Q8C006 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim35Q8C006 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim35Q8C006 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Trim35Q8C006 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim35Q8C006 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim35Q8C006 Gm44680-201ENSMUST00000208414 2910 ntBASIC5.51□□□□□ -1.53
Trim35Q8C006 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Trim35Q8C006 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim35Q8C006 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Trim35Q8C006 Gm22672-201ENSMUST00000104414 134 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 Gm11774-201ENSMUST00000118601 293 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 Gm12732-201ENSMUST00000121688 180 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC5.5□□□□□ -1.53
Trim35Q8C006 Gm43604-201ENSMUST00000199799 705 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 Gm45687-201ENSMUST00000209454 155 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 Gm3086-202ENSMUST00000221248 310 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 AC166113.1-201ENSMUST00000225258 475 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.5□□□□□ -1.53
Trim35Q8C006 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim35Q8C006 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms