Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm25592-201ENSMUST00000082635 131 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm26457-201ENSMUST00000082678 78 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim56Q80VI1 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm24671-201ENSMUST00000104159 158 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm23705-201ENSMUST00000104370 130 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm23841-201ENSMUST00000116951 114 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm12721-201ENSMUST00000120621 268 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm14810-201ENSMUST00000121628 486 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm23474-201ENSMUST00000158884 75 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm3370-201ENSMUST00000171785 500 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm22367-201ENSMUST00000178930 132 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm21960-201ENSMUST00000181924 452 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm27773-201ENSMUST00000184087 78 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm27421-201ENSMUST00000184729 167 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm38183-201ENSMUST00000193189 205 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm38332-201ENSMUST00000194189 147 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm43155-201ENSMUST00000202661 494 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.45□□□□□ -1.7
Trim56Q80VI1 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trim56Q80VI1 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim56Q80VI1 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm24792-201ENSMUST00000104286 128 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm26479-201ENSMUST00000122620 106 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm24720-201ENSMUST00000157518 166 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm26186-201ENSMUST00000157689 125 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm24885-201ENSMUST00000158783 270 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm17100-201ENSMUST00000168963 272 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm28010-201ENSMUST00000179485 126 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm27392-201ENSMUST00000185041 101 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm28849-201ENSMUST00000188127 174 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm28330-201ENSMUST00000190353 171 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm7182-201ENSMUST00000193351 732 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm37089-201ENSMUST00000195616 129 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm34779-201ENSMUST00000210036 263 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim56Q80VI1 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm25257-201ENSMUST00000083907 110 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.44□□□□□ -1.7
Trim56Q80VI1 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim56Q80VI1 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm13343-201ENSMUST00000116474 105 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm14541-201ENSMUST00000118985 157 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm14551-201ENSMUST00000120802 256 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm8244-201ENSMUST00000121254 264 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm23355-201ENSMUST00000177614 107 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm23148-201ENSMUST00000180367 107 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm27928-201ENSMUST00000183747 256 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm27545-201ENSMUST00000184755 202 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm37713-201ENSMUST00000191746 198 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Mir132-201ENSMUST00000083603 66 ntBASIC4.43□□□□□ -1.7
Trim56Q80VI1 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim56Q80VI1 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.42□□□□□ -1.7
Trim56Q80VI1 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim56Q80VI1 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms