Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Six4Q61321 Gm12636-201ENSMUST00000117395 624 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm15760-201ENSMUST00000119553 283 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm14945-201ENSMUST00000119556 1118 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm13059-201ENSMUST00000119881 398 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm14629-201ENSMUST00000122428 144 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm22891-201ENSMUST00000158641 164 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2□□□□□ -2.09
Six4Q61321 Gm28666-201ENSMUST00000186649 274 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2□□□□□ -2.09
Six4Q61321 Gm38044-201ENSMUST00000192964 487 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm37000-201ENSMUST00000193058 428 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2□□□□□ -2.09
Six4Q61321 AL929265.1-201ENSMUST00000213427 125 ntBASIC2□□□□□ -2.09
Six4Q61321 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Six4Q61321 Gm9068-201ENSMUST00000217393 455 ntBASIC2□□□□□ -2.09
Six4Q61321 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2□□□□□ -2.09
Six4Q61321 CT009733.1-203ENSMUST00000224033 451 ntBASIC2□□□□□ -2.09
Six4Q61321 AC160930.1-201ENSMUST00000227194 337 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm7984-201ENSMUST00000060640 538 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm25755-201ENSMUST00000083396 107 ntBASIC2□□□□□ -2.09
Six4Q61321 Mir322-201ENSMUST00000083484 95 ntBASIC2□□□□□ -2.09
Six4Q61321 Gm23516-201ENSMUST00000093728 107 ntBASIC2□□□□□ -2.09
Six4Q61321 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Six4Q61321 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.99□□□□□ -2.09
Six4Q61321 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Six4Q61321 Gm14657-201ENSMUST00000117461 302 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Gm6587-201ENSMUST00000120219 613 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Gm12825-201ENSMUST00000120249 563 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Gm12045-201ENSMUST00000122122 573 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.99□□□□□ -2.09
Six4Q61321 Gm22143-201ENSMUST00000157401 203 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Gm25488-201ENSMUST00000158728 118 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Gm37568-201ENSMUST00000191755 364 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Mir7217-201ENSMUST00000200304 62 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Gm44472-201ENSMUST00000204922 943 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Gm19140-201ENSMUST00000209790 421 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.99□□□□□ -2.09
Six4Q61321 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.99□□□□□ -2.09
Six4Q61321 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.99□□□□□ -2.09
Six4Q61321 Gm22578-201ENSMUST00000083730 107 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.99□□□□□ -2.09
Six4Q61321 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Six4Q61321 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.99□□□□□ -2.09
Six4Q61321 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.99□□□□□ -2.09
Six4Q61321 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Six4Q61321 Gm26077-201ENSMUST00000104064 123 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm8207-201ENSMUST00000171204 502 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm21758-201ENSMUST00000179336 819 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm21726-201ENSMUST00000179654 392 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
Six4Q61321 Gm29647-201ENSMUST00000188795 666 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm20832-201ENSMUST00000189076 665 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm28241-201ENSMUST00000190916 235 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm28504-201ENSMUST00000190977 666 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm37438-201ENSMUST00000192813 393 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm31511-201ENSMUST00000193134 657 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm35843-201ENSMUST00000193716 666 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm36728-201ENSMUST00000195782 665 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm19089-201ENSMUST00000197207 613 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm43286-201ENSMUST00000197420 424 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.98□□□□□ -2.09
Six4Q61321 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.98□□□□□ -2.09
Six4Q61321 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.98□□□□□ -2.09
Six4Q61321 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Six4Q61321 Gm24707-201ENSMUST00000082812 107 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm25582-201ENSMUST00000083412 110 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.98□□□□□ -2.09
Six4Q61321 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Six4Q61321 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
Six4Q61321 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Six4Q61321 Mir1192-201ENSMUST00000116976 121 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm12814-201ENSMUST00000117091 846 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm15844-201ENSMUST00000118016 576 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm15896-201ENSMUST00000118045 440 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm11784-201ENSMUST00000118568 474 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm9225-201ENSMUST00000121921 836 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm25294-201ENSMUST00000122791 104 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm22727-201ENSMUST00000158090 116 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm23777-201ENSMUST00000158994 259 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Six4Q61321 Gm17085-201ENSMUST00000165425 502 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
Six4Q61321 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm22264-201ENSMUST00000178200 107 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm24264-201ENSMUST00000179835 94 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm29604-201ENSMUST00000187176 163 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm28745-201ENSMUST00000190069 305 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.97□□□□□ -2.09
Six4Q61321 Gm43652-201ENSMUST00000196219 675 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Gm43402-201ENSMUST00000197159 159 ntBASIC1.97□□□□□ -2.09
Six4Q61321 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms