Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm14238-201ENSMUST00000120227 323 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm12045-201ENSMUST00000122122 573 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm25220-201ENSMUST00000157546 95 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm5329-201ENSMUST00000186898 463 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm43512-201ENSMUST00000198495 176 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm44181-201ENSMUST00000203106 483 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm18991-201ENSMUST00000209225 746 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm25788-201ENSMUST00000082721 131 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm22265-201ENSMUST00000082947 116 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm25124-201ENSMUST00000083345 164 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Gm23040-201ENSMUST00000083869 163 ntBASIC1.59□□□□□ -2.15
Trav2Q5R1I9 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Trav2Q5R1I9 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm23950-201ENSMUST00000104026 129 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm13439-201ENSMUST00000117541 409 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm14868-201ENSMUST00000117840 216 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm14049-201ENSMUST00000121009 636 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm24056-201ENSMUST00000158617 146 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm18397-201ENSMUST00000176704 587 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm19932-201ENSMUST00000177033 313 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm28000-201ENSMUST00000184380 85 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm27443-201ENSMUST00000184660 98 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm29429-201ENSMUST00000187071 121 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm44182-201ENSMUST00000204052 115 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm44585-201ENSMUST00000207150 607 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm44656-201ENSMUST00000208428 490 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm22247-201ENSMUST00000082476 131 ntBASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trav2Q5R1I9 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm12191-201ENSMUST00000118307 348 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm11784-201ENSMUST00000118568 474 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm12935-201ENSMUST00000119352 246 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm6444-201ENSMUST00000119611 458 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm16328-201ENSMUST00000126985 196 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Mir7017-201ENSMUST00000184894 62 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm28745-201ENSMUST00000190069 305 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm44324-201ENSMUST00000198517 135 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav2Q5R1I9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm22061-201ENSMUST00000082557 107 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Snora69-201ENSMUST00000083708 131 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.57□□□□□ -2.16
Trav2Q5R1I9 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm15279-201ENSMUST00000155593 288 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm24783-201ENSMUST00000157639 100 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm22611-201ENSMUST00000158288 150 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm17062-201ENSMUST00000166987 461 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm27942-201ENSMUST00000184669 101 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm20776-201ENSMUST00000189940 700 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm38281-201ENSMUST00000192301 315 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm22005-201ENSMUST00000082795 141 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm22443-201ENSMUST00000082890 107 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Gm25257-201ENSMUST00000083907 110 ntBASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trav2Q5R1I9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm15112-201ENSMUST00000120152 860 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm22098-201ENSMUST00000157930 85 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm25460-201ENSMUST00000157954 127 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm24857-201ENSMUST00000158061 310 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm22764-201ENSMUST00000158370 92 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm17061-201ENSMUST00000163167 499 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm21744-201ENSMUST00000178403 662 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm21171-201ENSMUST00000180048 673 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm29413-201ENSMUST00000186019 880 ntBASIC1.55□□□□□ -2.16
Trav2Q5R1I9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms