Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm14894-201ENSMUST00000117170 270 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm13210-201ENSMUST00000121483 273 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm15065-201ENSMUST00000121699 273 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm22027-201ENSMUST00000122737 127 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.25□□□□□ -1.73
Sox1P53783 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sox1P53783 Gm26045-201ENSMUST00000157862 97 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm5258-201ENSMUST00000165437 327 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm37449-201ENSMUST00000193016 270 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm18658-201ENSMUST00000195558 270 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm8874-201ENSMUST00000196826 286 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm44030-201ENSMUST00000204865 432 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm7422-201ENSMUST00000220115 640 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sox1P53783 Gm25081-201ENSMUST00000082534 108 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sox1P53783 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sox1P53783 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sox1P53783 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sox1P53783 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sox1P53783 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sox1P53783 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox1P53783 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Sox1P53783 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox1P53783 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.24□□□□□ -1.73
Sox1P53783 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox1P53783 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.24□□□□□ -1.73
Sox1P53783 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.24□□□□□ -1.73
Sox1P53783 Gm25606-201ENSMUST00000158363 95 ntBASIC4.24□□□□□ -1.73
Sox1P53783 Gm16303-201ENSMUST00000161498 390 ntBASIC4.24□□□□□ -1.73
Sox1P53783 Gm24084-201ENSMUST00000175173 137 ntBASIC4.24□□□□□ -1.73
Sox1P53783 Gm27851-201ENSMUST00000183529 63 ntBASIC4.24□□□□□ -1.73
Sox1P53783 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.24□□□□□ -1.73
Sox1P53783 Gm37417-201ENSMUST00000195257 454 ntBASIC4.24□□□□□ -1.73
Sox1P53783 Gm43978-201ENSMUST00000203491 451 ntBASIC4.24□□□□□ -1.73
Sox1P53783 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.24□□□□□ -1.73
Sox1P53783 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.24□□□□□ -1.73
Sox1P53783 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.24□□□□□ -1.73
Sox1P53783 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.24□□□□□ -1.73
Sox1P53783 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox1P53783 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sox1P53783 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Sox1P53783 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox1P53783 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox1P53783 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sox1P53783 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sox1P53783 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox1P53783 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Sox1P53783 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox1P53783 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox1P53783 Neat1-201ENSMUST00000173672 20771 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox1P53783 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm25538-201ENSMUST00000101943 107 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox1P53783 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm8129-201ENSMUST00000118230 213 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox1P53783 Gm25920-201ENSMUST00000158307 99 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm26028-201ENSMUST00000158660 294 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm24676-201ENSMUST00000158758 75 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm22531-201ENSMUST00000158819 140 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm16545-201ENSMUST00000161968 463 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm16318-201ENSMUST00000162402 601 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm22398-201ENSMUST00000174941 125 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm25731-201ENSMUST00000175167 125 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox1P53783 Gm28755-201ENSMUST00000185773 199 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox1P53783 Gm44393-201ENSMUST00000197418 138 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm43651-201ENSMUST00000199796 439 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm44389-201ENSMUST00000203795 182 ntBASIC4.23□□□□□ -1.73
Sox1P53783 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.23□□□□□ -1.73
Sox1P53783 AC150314.1-201ENSMUST00000214798 238 ntBASIC4.23□□□□□ -1.73
Sox1P53783 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm46993-201ENSMUST00000220708 259 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.23□□□□□ -1.73
Sox1P53783 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Snord82-201ENSMUST00000082889 70 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm23454-201ENSMUST00000083332 133 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox1P53783 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.23□□□□□ -1.73
Sox1P53783 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Sox1P53783 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.23□□□□□ -1.73
Sox1P53783 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox1P53783 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox1P53783 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.22□□□□□ -1.73
Sox1P53783 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox1P53783 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sox1P53783 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox1P53783 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.22□□□□□ -1.73
Sox1P53783 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox1P53783 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sox1P53783 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sox1P53783 Gm26018-201ENSMUST00000104406 128 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm15223-201ENSMUST00000120989 826 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms